BIP Papers & Publications


Papers & Publications	BIP Journal Papers Z. Lacroix, C. Legendre, L. Raschid, B. Snyder: "BIPASS: BioInformatics Pipelines Alternative Splicing Services" Nucleic Acids Research, Web Server Issue, Oxford University Press (DOI 10.1093/nar/gkm344), Volume 35 (WebServer Issue), pp W292-W296, July 2007. BIP Published Conference Papers B. A. Eckman, T. Gaasterland, Z. Lacroix, L. Raschid, B. Snyder, and M.-E. Vidal: "Implementing a Bioinformatics Pipeline (BIP) on a Mediator Platform: Comparing Cost and Quality of Alternate Choices" Workshop on Workflow and Data Flow for Scientific Applications, Atlanta, Georgia, April 8, 2006 -- published by IEEE, p 67. Z. Lacroix and C. Legendre: "Analysis of a Scientific Protocol: Selecting Suitable Resources" In First IEEE International Workshop on Service Oriented Technologies for Biological Databases and Tools, in conjunction with International Conference on Web Services / International Conference on Services Computing, IEEE Press, volume Services, pages 130–137, Salt Lake City, Utah, July 2007. BIP Poster and Demonstration Papers M. Aziz, Z. Lacroix, C. Legendre, H. Ménager, L. Raschid, and B. Snyder: "BioInformatics Pipeline Alternative Splicing Services", 6th International Computer Society Computational Systems Bioinformatics Conference (CSB), San Diego, CA, August 2007. M. Aziz, Z. Lacroix, C. Legendre, H. Ménager, L. Raschid, and B. Snyder: "BioInformatics Pipeline Alternative Splicing Services", Data Integration in the Life Sciences (DILS), Philadelphia, Pennsylvania, June 2007. B. A. Eckman, T. Gaasterland, Z. Lacroix, L. Raschid, B. Snyder, and M.-E. Vidal: "Implementing a Bioinformatics Pipeline (BIP) on the IBM WebSphere Information Integrator Platform: An Experiment Paper", 9th Annual Conference on Computational Genomics, Baltimore, October 28-31, 2006. B. A. Eckman, T. Gaasterland, Z. Lacroix, L. Raschid, B. Snyder, and M.-E. Vidal: "Benefits and costs of bioinformatics pipelines: an experiment", 5 th International Computer Society Computational Systems Bioinformatics Conference (CSB), Palo Alto, CA, August 2006.


Last updated: 12/12/2006

BIP Journal Papers

Z. Lacroix, C. Legendre, L. Raschid, B. Snyder:
"BIPASS: BioInformatics Pipelines Alternative Splicing Services" Nucleic Acids Research, Web Server Issue, Oxford University Press (DOI 10.1093/nar/gkm344), Volume 35 (WebServer Issue), pp W292-W296, July 2007.

BIP Published Conference Papers

B. A. Eckman, T. Gaasterland, Z. Lacroix, L. Raschid, B. Snyder, and M.-E. Vidal:
"Implementing a Bioinformatics Pipeline (BIP) on a Mediator Platform: Comparing Cost and Quality of Alternate Choices" Workshop on Workflow and Data Flow for Scientific Applications, Atlanta, Georgia, April 8, 2006 -- published by IEEE, p 67.

Z. Lacroix and C. Legendre:
"Analysis of a Scientific Protocol: Selecting Suitable Resources" In First IEEE International Workshop on Service Oriented Technologies for Biological Databases and Tools, in conjunction with International Conference on Web Services / International Conference on Services Computing, IEEE Press, volume Services, pages 130–137, Salt Lake City, Utah, July 2007.

BIP Poster and Demonstration Papers

M. Aziz, Z. Lacroix, C. Legendre, H. Ménager, L. Raschid, and B. Snyder:
"BioInformatics Pipeline Alternative Splicing Services", 6th International Computer Society Computational Systems Bioinformatics Conference (CSB), San Diego, CA, August 2007.

M. Aziz, Z. Lacroix, C. Legendre, H. Ménager, L. Raschid, and B. Snyder:
"BioInformatics Pipeline Alternative Splicing Services", Data Integration in the Life Sciences (DILS), Philadelphia, Pennsylvania, June 2007.

B. A. Eckman, T. Gaasterland, Z. Lacroix, L. Raschid, B. Snyder, and M.-E. Vidal:
"Implementing a Bioinformatics Pipeline (BIP) on the IBM WebSphere Information Integrator Platform: An Experiment Paper", 9th Annual Conference on Computational Genomics, Baltimore, October 28-31, 2006.

B. A. Eckman, T. Gaasterland, Z. Lacroix, L. Raschid, B. Snyder, and M.-E. Vidal:
"Benefits and costs of bioinformatics pipelines: an experiment",
5 th International Computer Society Computational Systems Bioinformatics Conference (CSB), Palo Alto, CA, August 2006.